2006 Vol. 25, No. 3

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Articles
Long baroclinic Rossby waves with periods of about 500 d near 20°N in the northwest Pacific Ocean
CHEN Haiying, QIAO Fangli, FANG Guohong, WANG Yonggang, WEI Zexun
2006, (3): 1-10.
Abstract:
On the basis of maps of sea level anomalies data set from October 1992 to January 2004, pronounced low frequency variations with periods of about 500 d are detected in the area near 20°N from 160°W to 130°E. A linear two-layer model is employed to explain the mechanism. It is found that the first-mode long baroclinic Rossby waves at 20°N in the northwest Pacific propagate westward in the form of free waves at a speed of about 10.3 cm/s. This confirms that the observed low frequency variabilities appear as baroclinic Rossby waves. It further shows that these low frequency variabilities around 20°N in the northwest Pacific can potentially be predicted with a lead up to 900 d.
Decadal-to-interdecadal response and adjustment of the North Pacific to prescribed surface forcing in an oceanic general circulation model
FANG Jiabei, RONG Xinyao, YANG Xiuqun
2006, (3): 11-24.
Abstract:
The simulation of a higher-resolution oceanic GCM forced with COADS surface conditions during 1945~1993 was analyzed with insight into how the North Pacific responds to the surface forcing. The decadal-to-interdecadal variabilities in the thermal and dynamical fields especially those associated with the 1976/1977 regime shift in the North Pacific were investigated. The model successfully captures the dominant SST anomaly mode on the decadal-to-interdecadal time scales as well as the major feature of SST anomalies in the 1976/1977 regime shift. The model also successfully reproduces two typical subduction events that link the tropical and extratropical oceanic temperature anomalies during the 1970s and the 1980s. Most importantly, the model simulates the dynamical adjustment of the upper ocean under the surface wind forcing. The typical surface circulation anomaly is characterized by a pattern that is simultaneously related to the wind stress anomalies. The typical anomalous pattern for the entire upper-ocean is characterized by coherent anomalies of two oceanic gyres, i.e., the subtropical and subpolar gyres. The delayed response and slower adjustment of the gyres, especially of the subpolar gyre, give rise to a persistent SST anomaly in the central North Pacific. The upper-ocean heat budgets in three target regions, i.e., the central North Pacific, the Californian coastal region and the KOE region, are examined.The cooling in the central North Pacific around 1976/1977 is attributed to the heat flux and meridional advection anomalies. The associated warming in the Californian coastal region is only due to the heat flux anomaly. A cooling shift in the KOE region which lags that in the central basin by 3 to 4 a is largely due to the meridional advection anomaly and the heat flux acts only as a damping role.
Atmospheric correction of Landsat data for the retrieval of sea surface temperature in coastal waters
XING Qianguo, CHEN Chuqun, SHI Ping, YANG Jingkun, TANG Shilin
2006, (3): 25-34.
Abstract:
A mono-window algorithm was introduced to retrieve sea surface temperature (SST) using Landsat data in coastal waters. In this algorithm, the effective mean air temperature and the water vapor content of air column were estimated with the local meteorological parameters of air temperature and relative humidity, based on the facts that in the troposphere, (1) air temperature decreases linearly with the altitude, and (2) water vapor content lapses exponentially with the altitude. The sea-truth temperature data and MODIS Terra SST product were used to validate the SST retrieved from Landsat TM and ETM+ thermal infrared (TIR) data with the algorithm. The results show that the algorithm can improve the spatial temperature contrast which is often masked due to water vapor effects, and the temperature derived from the algorithm is closer to the sea-truth SST. When applying the algorithm, the initial parameters of air temperature and relative humidity can be easily collected from local meteorological stations, and there is no need to identify the model of air profile.
Neural network wind retrieval from ERS-1/2 scatterometer data
LIN Mingsen, SONG Xingai, JIANG Xingwei
2006, (3): 35-39.
Abstract:
A neural network methodology is presented to retrieve wind vectors from ERS-1/2 scatterometer data. The wind directional ambiguities are eliminated by a circular median filter algorithm. All data come from ERS-1/2 scatterometer data collocated pairs with CMCD4 vector. Comparing the results with CMCD4 and ECMWF wind vector,they agree well, which indicates that it is possible to extract wind vector from the ERS-1/2 scatterometer with the neural network method.
Shenzhou-4 spaceborne altimeter waveform processing and significant wave height retrieval
JI Yonggang, ZHANG Jie, ZHANG Youguang, MENG Junmin
2006, (3): 40-47.
Abstract:
The Shenzhou-4 spaceborne (SZ-4) altimeter waveforms were processed, and then the significant wave heights (SWH) was retrieved on the basis of waveform fitting and waveform retracking. Waveforms processing includes the waveform 1 s averaging, the elimination of thermal noise and the waveforms normalization. Double peaks were found on each SZ-4 waveform, and it was pointed out that the region of waveforms with the second peak is abnormal and its effects on the whole waveform in the waveform fit should be taken into consideration. To obtain the width of the waveform leading-edge, a method was proposed to find the starting point of waveform, and the half-power point of waveform was found by retracking the waveform. The normalized waveforms were fitted with the Haynes model by using the weighting least square fit method. Then the selections of the weighting coefficients and their effects on significant wave hight retrieving were discussed, and the optimal five-region weighting method was proposed. At last, the SWH data of SZ-4 altimeter retrieved by using the proposed method were compared with those of ERS-2 and Jason-1 altimeter, and it was concluded that the SZ-4 altimeter can detect significant wave height.
The diffusive fluxes of inorganic nitrogen across the intertidal sediment-water interface of the Changjiang Estuary in China
HOU Lijun, LIU Min, XU Shiyuan, LU Jianjian, OU Dongni, YU Jie
2006, (3): 48-57.
Abstract:
Ammonium and nitrate concentrations were analyzed in near-bottom water and pore water collected from ten stations of the intertidal flat of the Changjiang Estuary during April, July, November and February. The magnitudes of the benthic exchange fluxes were determined on the basis of concentration gradients of ammonium and nitrate at the near-bottom water and interstitial water interface were greatly regulated by the production of ammonium in surface sediments, while nitrate fluxes ranged from -0.38 to 1.36 μg/(cm2·d) and were dom inated by nitrate concentrations in the tidalwater. It was found that ammonium was mainly released from sediments into water columns at most of stations whereas nitrate was mostly diffused from overlying waters to intertidal sediments.In total, 823.75 t/a ammonium-N was passed from intertidal sediments to water while about 521.90 t/a nitrate-N was removed from overlying waters to intertidal sediments. This suggests that intertidal sediments had the significant influence on modulating inorganic nitrogen in the tidal water.
Western fault zone of South China Sea and its physical simulation evidences
SUN Longtao, SUN Zhen, ZHAN Wenhuan, SUN Zongxun, ZHAO Minghui, XIA Shaohong
2006, (3): 58-67.
Abstract:
The western fault zone of the South China Sea is a strike-slip fault system and consists of four typical strike-slip faults. It is the western border of the South China Sea. The formation of the system is due to the extrusion of Indo-China Peninsula caused by the collision of India with Tibet and the spreading of the South China Sea in Cenozoic. There are five episodes of tectonic movement along this fault zone, which plays an important role in the Cenozoic evolution of the South China Sea. By the physical modeling experiments, it can be seen the strike-slip fault undergoes the sinistral and dextral movement due to the relative movement velocity change between the South China Sea block and the Indo-China block. The fault zone controls the evolution of the pull basins locating in the west of the South China Sea.
Distributions of chlorophyll a and carbon fixed strength of phyto-plankton in autumn of the southern Huanghai Sea waters
ZHENG Guoxia, SONG Jinming, DAI Jicui, WANG Yiming
2006, (3): 68-81.
Abstract:
Chlorophyll a (Chl a) concentration and primary productivity (PP), namely, carbon fixed strength of phytoplankton along four transects in the southern Huanghai Sea (SHS) were studied for their distribution features and controlling mechanisms based on the investigations from 17 October to 3 November 2005. The Chl a concentration in the study waters dynamically changed spatially.Surface Chl a concentrations ranged from 0.11 to 2.38 mg/m3 with higher and lower values observed in the nutrient-laden inshore waters and central part of the SHS occupied by oligotrophic current, respectively. The vertical distribution of Chl a concentration showed a predominant pattern of subsurface concentration maximum profile. It followed the previous result of the deep dissolved oxygen concentration maximum profile, which was significantly correlated with phytoplankton and regional water mass. The primary productivity of carbon in autumn of the SHS, ranging from 95 to 1 634 mg/(m2·d) mainly varied with nutrient condition, especially phosphate concentration in seawater and hydrological condition. Furthermore, associating the present study results together with previous studies, the annual value of carbon fixed production of phytoplankton in the entire marginal seas of East China(including the Bohai Sea, the Huanghai Sea and the East China Sea) was estimated to be 222 Mt, which accounted for 2% of that in the global margins. Besides, it was as 16.2 times as the annual value of apparent carbon sink strength (13.96 Mt) in the marginal seas of East China. This multiple was different in different sea areas (3.0 in the Bohai Sea, 6.7 in the Huanghai Sea and 81.6 in the East China Sea).
Assessing genetic diversity of wild populations of Japanese flounderusing AFLP markers
XU Xiaofei, ZHANG Quanqi, WANG Zhigang, QI Jie, ZHANG Zhifeng, BAO Zhenmin, Heisuke Nakagawa
2006, (3): 82-89.
Abstract:
Amplified fragment length polymorphism (AFLP) analysis was used to evaluate the genetic diversity of four wild geographical populations of Japanese flounder (Paralichthys olivaceus). A total of 775 loci (58.32% of which was polymorphic) in the range between 100 and 1 300 base pairs were detected from 110 individuals using seven primer combinations. The percentage of polymorphic loci detected by single primer combination for each population was calculated, ranging from 19.59% to 53.33%. Genetic similarities within and among the populations were calculated from the binary matrices of presence-absence. Phylogenetic tree of four populations was constructed by using the UPGMA method using PHYLIP Version 3.5. According to intrapopulation genetic similarities, CW population displayed the highest genetic diversity value and KY population had the lowest genetic diversity value.The distance between CW and CF populations was the farthest, which was possibly resulted from the farthest distance of Weihai of Shandong and Fujian of China compared with the geographical distance between other locations of populations. The subpopulation differentiation value (Gst) is 0.356 5, showing a certain extent of differentiation among the four geographical populations. AFLP technology was confirmed to be an effective tool to assess within-and among-population genetic diversity of Japanese flounder. The present survey provided significant insights for research in the Japanese flounder breeding program.
Settlement and metamorphosis of Styela canopus Savigny larvae in response to some neurotransmitters and thyroxin
FENG Danqing, HUANG Ying, KE Caihuan, ZHOU Shiqiang, LI Shaojing
2006, (3): 90-97.
Abstract:
The larvae of ascidian Styela canopus Savigny were treated with epinephrine, norepinephrine, L-DOPA, GABA and thyroxin to test the ability of these compounds to induce or inhibit larval settlement and metamorphosis. The results showed that epinephrine,norepinephrine and L-DOPA at the concentration of 1 μmol/dm3 induced larval settlement and metamorphosis in S. canopus, with short exposure (1 h) to 1 μmoL/dm3 of L-DOPA inducing rapid settlement. In contrast, GABA at the concentrations of 0.1~100.0 μmol/dm3 significantly inhibited the settlement and metamorphosis of S. canopus larvae. In addition, thyroxin at 1~50μg/dm3 had no effect on larval settlement and metamorphosis in S. canopus. These results suggest the importance of neurotransmitters in the settlement and metamorphosis of S. canopus larvae.
Molecular phylogenetic analysis of sulfate-reducing bacteria from deep sediment layers of the tropical West Pacific warm pool
LUO Zhuhua, YE Dezan, HUANG Xiangling
2006, (3): 98-107.
Abstract:
The diversity of sulfate-reducing bacteria (SRB) from deep layers of deep-sea sediments[more than 2 m bsf (below seafloor)] of two sites (W01-3 and WP01-4) in a tropical West Pacific warm pool region was characterized by using molecular phylogenetic analysis. The results of culture-independent samples demonstrated that the dominant clones from both sites were related to Grampositive spore forming genus, Desulfotomaculum, which accounted for 36.8% of all the sequencing clones from Site WP01-3 and 62.8% from Site WP01-4. However, the other SRB group which was generally reported to be predominant in the deep-sea sediments of other regions, δ-subclass of the proteobacteria was found to be in very low percentages. Therefore, it could be speculated that there existed a unique chemical environment in the deep-sea sediment of this warm pool region. When comparing the Desulfotomaculum sp. related sequences from both sites, it was revealed that though the Desulfotomaculum-like sequences from Site WP01-3 were more diverse than those from Site WP01-4, all these sequences from both sites showed high similarity and formed a new phylogenetically homogeneous cluster in the Desulfotomaculum genus which had never been reported before. Successful enrichment of SRB was only achieved from samples of Site WP01-4 and the sequence analysis of culture-dependent samples further confirmed the dominance of Desulfotomaculum genus. But Desulfotomaculum-related sequences from culture-dependent and culture-independent samples belonged to two different clusters respectively. This difference showed the choice of cultivation to the microorganisms.
Chromosomal localization of the major ribosomal RNA genes in scallop Chlamys farreri
HUANG Xiaoting, BAO Zhenmin, BI Ke, HU Jingjie, ZHANG Can, ZHANG Quanqi, HU Xiaoli
2006, (3): 108-115.
Abstract:
The chromosomes of Chlamys farreri were analyzed by means of silver staining and fluorescence in situ hybridization (FISH) with 18S-28S rDNA probe. Probe was made by PCR amplification of a DNA fragment containing internal transcribed spacers ITS1 between 18S and 5.8S ribosomal RNA gene, ITS2 between 5.8S and 28S ribosomal RNA gene and 5.8S rRNA gene, and labeled by PCR incorporation of bio-16-dUTP. FISH signals were located on the short arm of subtelocentric chromosome 10.After silverstaining, nucleolus organizer regions (NORs) could be observed on the telomere of the short arm of chromosome 10.However,one metaphase spread displayed an additional silver spot on the short arm of subtelocentric chromosome 12.
Quantitative model of trophic interactions in Beibu Gulf ecosystem in the northern South China Sea
CHEN Zuozhi, QIU Yongsong, JIA Xiaoping
2006, (3): 116-124.
Abstract:
A mass-balanced model was constructed to determine the flow-energy in a community of fishes and invertebrates in the Beibu Gulf,northern South China Sea using Ecopath and Ecosim software. Input parameters were taken from the literature, except for the biomass of fish groups which was obtained from trawl surveys during October 1997 to May 1999 in the study area. The model consisted of 16 functional groups (boxes), including one marine mammal and seabirds, each representing organisms with a similar role in the food web, and only covered the main trophic flow in the Beibu Gulf ecosystem. The results showed that the food web of Beibu Gulf was dominated by the detrital path and benthic invertebrates played a significant role in transferring energy from the detritus to higher trophic levels; phytoplankton was a primary producer and most utilized as a food source. Fractional trophic levels ranged from 1.0 to 4.08 with marine mammals occupying the highest trophic level. Using network analysis, the system network was mapped into a linear food chain and six discrete trophic levels were found with a mean transfer efficiency of 16.7% from the detritus, 16.2% from the primary producer within the ecosystem. The biomass density of the commercially utilized species estimated by the model is 8.46 t/km2, only 0.48% of the net primary production.
Numerical simulation of the influences of sinker weight on the deformation and load of net of gravity sea cage in uniform flow
LI Yucheng, ZHAO Yunpeng, GUI Fukun, TENG Bin, DONG Guohai
2006, (3): 125-137.
Abstract:
A numerical model for determining fishing net configuration and load is developed, based on the lumped masses method. The model is used to analyze the influences on the net of gravity sea cage by different sinker weights in uniform flow. The net of gravity sea cage is simulated under different current velocities and sinker weights. In order to verify the validity of the numerical results,model test results made by Lader and Enerhaug are cited and compared with the numerical ones. The results of numerical simulation agree well with the experimental ones and the agreement is within an error range of 13% under different velocities and sinker weights. The numerical results indicate that increasing the sinker weight can effectively reduce the net deformation, but the total drag force on the net will increase accordingly. Results will give references for better knowledge of the hydrodynamic behavior of gravity sea cage.
Research Notes
Studies on the edwardsiellosis and characterization of pathogenic bacteria from diseased flounder (Paralichthys olivaceus L.) and turbot (Scophthalmus maximus L.)
FANG Hai, ZHANG Xiaojun, CHEN Cuizhen, JIN Xiaomin, WANG Xiuyun
2006, (3): 138-147.
Abstract:
Edwardsiellosis of flounder and turbot occurring in different mariculture farms during 2001~2004 was examined, including the conditions of disease occurrence, clinical signs and pathological changes. The results showed that all diseased fishes expressed bacterial septicaemia. A total of 148 strains were identified using a combination of traditional physiological and biochemical tests and partial 16S rRNA gene analysis. In addition, the mole fraction G + C ratio of the DNA of representative strain of isolates and serum homology were detected, and pathogenicity tests of isolates were conducted by experimental infection. The results revealed that 148 strains were identified as E. tarda of genus Edwardsiella, all the isolates are of serologic similarity, and have strong pathogenicity to flounder and turbot.
Seasonal abundance and distribution of pelagic tunicates (Chordata: Thaliacea) in the central South China Sea
LIN Mao, LIN Rongcheng
2006, (3): 148-156.
Abstract:
A total of 168 macro-zooplankton samples from 42 stations in the central South China Sea (12°~20° N, 111°~118° E, an area of about 64×104 km2) were collected in September 1983 (autumn), April 1984 (spring), August 1984 (summer) and December 1984 (winter). Twenty-three species and subspecies of tunicates were found, of which Thalia democratica complex (including T. d. orientalis and T. d. echinata) and Doliolum denticulatum were the dominant species, and accounted for 95.7%,90.0%, 91.8% and 90.5% of the total tunicates found in autumn, winter, spring and summer, respectively. The highest abundance (with a mean of 2.37 ind./m3) occurred in autumn. There are strong correlations between the abundances of the tunicates and those of phytoplankton and chlorophyll a concentration. However, tunicates also aggregate in areas with low primary production in the autumn survey, probably due to the water circulation pattern.