Mitochondrial genome of <i>Chthamalus challengeri</i> (Crustacea: Sessilia): gene order comparison within Chthamalidae and phylogenetic consideration within Balanomorpha

Panpan Chen; Jun Song; Xin Shen; Yuefeng Cai; Ka Hou Chu; Yongqi Li; Mei Tian

doi:10.1007/s13131-019-1355-0

Volume 38 Issue 6

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Panpan Chen, Jun Song, Xin Shen, Yuefeng Cai, Ka Hou Chu, Yongqi Li, Mei Tian. Mitochondrial genome of Chthamalus challengeri (Crustacea: Sessilia): gene order comparison within Chthamalidae and phylogenetic consideration within Balanomorpha[J]. Acta Oceanologica Sinica, 2019, 38(6): 25-31. doi: 10.1007/s13131-019-1355-0

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Panpan Chen, Jun Song, Xin Shen, Yuefeng Cai, Ka Hou Chu, Yongqi Li, Mei Tian. Mitochondrial genome of Chthamalus challengeri (Crustacea: Sessilia): gene order comparison within Chthamalidae and phylogenetic consideration within Balanomorpha[J]. Acta Oceanologica Sinica, 2019, 38(6): 25-31. doi: 10.1007/s13131-019-1355-0

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Mitochondrial genome of Chthamalus challengeri (Crustacea: Sessilia): gene order comparison within Chthamalidae and phylogenetic consideration within Balanomorpha

doi: 10.1007/s13131-019-1355-0

Panpan Chen^{1, 2},
Jun Song^{1, 2},
Xin Shen^{1, 2
,
,},
Yuefeng Cai¹,
Ka Hou Chu³,
Yongqi Li¹,
Mei Tian^{1, 2
,
,}

1.
Jiangsu Key Laboratory of Marine Bioresources and Environment/Jiangsu Key Laboratory of Marine Biotechnology, Huaihai Institute of Technology, Lianyungang 222005, China
2.
Co-Innovation Center of Jiangsu Marine Bio-industry Technology, Lianyungang 222000, China
3.
Simon F. S. Li Marine Science Laboratory, School of Life Sciences, The Chinese University of Hong Kong, Shatin, N.T., Hong Kong, China

Funds: The National Natural Science Foundation of China (NSFC) under contract No. 41876147; the Jiangsu Priority Academic Program Development (PAPD); the Graduate Research and Innovation Projects under contract Nos KYCX18_2570 and KYCX18_2566; Jiangsu Qinglan; Jiangsu 333; Jiangsu Six Talent Peaks and Lianyungang 521 Talent Projects.

More Information

Corresponding author: E-mail: shenthin@163.com; E-mail: genomeresearch@163.com
Received Date: 2017-04-16
Accepted Date: 2017-06-19
Publish Date: 2019-06-01

Abstract

Abstract

Acorn barnacles are important model species in researches on intertidal ecology, larval development and bio-fouling. At present, with the development of mitochondrial genomics, it is helpful to understand the phylogenetic relationship from the mitogenomic level. The complete mitochondrial genome of Chthamalus challengeri was presented. The genome is a circular molecule of 15 358 bp. Compared with other species in Balanomorpha, the non-coding region is longer, while the length of the genes is similar to the other species. The overall A+T content of the mitochondrial genome of C. challengeri is 70.5%. There are variations of initiation and stop codons in the known Balanomorpha mitochondrial genomes. The C. challengeri and C. antennatus within the same genus share the identical gene arrangement. However, the gene arrangement of different genera in Chthamalidae is different, as there is a translocation between two tRNA genes and an inversion involving a large gene block. In particular, both srRNA and lrRNA of the two species in Chthamalus are encoded in the heavy strand, differing from the former Balanomorpha species. The topology and gene arrangement in Chthamalidae support each other. Phylogenetic analysis indicates that the Chthamalidae is monophyletic, while the Balanidae and Archaeobalanidae are polyphyletic.
- Balanomorpha,
- Chthamalus challengeri,
- mitochondrial genome,
- gene rearrangement,
- phylogeny

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References(27)

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