Citation: | HU Zhangxi, DENG Yunyan, LI Yuhang, TANG Ying Zhong. The morphological and phylogenetic characterization for the dinoflagellate Margalefidinium fulvescens (=Cochlodinium fulvescens) isolated from the Jiaozhou Bay, China[J]. Acta Oceanologica Sinica, 2018, 37(10): 11-17. doi: 10.1007/s13131-018-1295-0 |
Al-Azri A R, Piontkovski S A, Al-Hashmi K A, et al. 2014. Mesoscale and nutrient conditions associated with the massive 2008 Cochlodinium polykrikoides bloom in the Sea of Oman/Arabian Gulf. Estuaries and Coasts, 37(2): 325–338
|
Cho E S, Costas E. 2004. Rapid monitoring for the potentially ichthyotoxic dinoflagellate Cochlodinium polykrikoides in Korean coastal waters using fluorescent probe tools. Journal of Plankton Research, 26(2): 175–180
|
Curtiss C C, Langlois G W, Busse L B, et al. 2008. The emergence of Cochlodinium along the California Coast (USA). Harmful Algae, 7(3): 337–346
|
Daugbjerg N, Hansen G, Larsen J, et al. 2000. Phylogeny of some of the major genera of dinoflagellates based on ultrastructure and partial LSU rDNA sequence data, including the erection of three new genera of unarmoured dinoflagellates. Phycologia, 39(4): 302–317
|
Du Qi, Huang Yijian, Wang Xiaofeng. 1993. Toxic dinoflagellate red tide by a Cochlodinium sp. along the coast of Fujian, China. In: Smayda T J, Shimizu Y, eds. Toxic Phytoplankton Blooms in the Sea. New York: Elsevier, 235–238
|
Gárate-Lizárraga I. 2014. Occurrence of Cochlodinium fulvescens (Gymnodiniales: Dinophyceae) in the southwestern Gulf of California. Revista de Biología Marina y Oceanografía, 49(1): 123–127
|
Gómez F. 2012. A checklist and classification of living dinoflagellates (Dinoflagellata, Alveolata). CICIMAR Océanides, 27(1): 65–140
|
Gómez F, Richlen M L, Anderson D M. 2017. Molecular characterization and morphology of Cochlodinium strangulatum, the type species of Cochlodinium, and Margalefidinium gen. nov. for C. polykrikoides and allied species (Gymnodiniales, Dinophyceae). Harmful Algae, 63: 32–44
|
Guangdong Ocean and Fishery Bureau. 2006. Bulletin of Marine Environmental Quality (in Chinese). http://www.gdofa.gov.cn/gb/content/post_107578.html [2007-06-07/2017-06-08]
|
Guillard R R L. 1975. Culture of phytoplankton for feeding marine invertebrates. In: Smith W L, Chanley M H, eds. Culture of Marine Invertebrate Animals. New York: Plenum Press, 26–60
|
Guindon S, Dufayard J F, Lefort V, et al. 2010. New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. Systematic Biology, 59(3): 307–321
|
Guiry M D, Guiry G M. 2011. AlgaeBase. World-wide Electronic Publication. Galway: National University of Ireland. http://www.algaebase.org [2017-06-07]
|
Hall T A. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symposium Series, 41: 95–98
|
Harun S N R, Mohammad-Noor N, Ahmad Z, et al. 2015. First report of Cochlodinium polykrikoides (Dinophyceae), a harmful algal bloom (HAB) species in the coastal waters of Peninsular Malaysia. Malaysian Journal of Science, 34(1): 87–92
|
Howard M D A, Jones A C, Schnetzer A, et al. 2012. Quantitative real-time polymerase chain reaction for Cochlodinium fulvescens (Dinophyceae), a harmful dinoflagellate from California coastal waters1. Journal of Phycology, 48(2): 384–393
|
Iwataki M, Kawami H, Matsuoka K. 2007. Cochlodinium fulvescens sp. nov. (Gymnodiniales, Dinophyceae), a new chain-forming unarmored dinoflagellate from Asian coasts. Phycological Research, 55(3): 231–239
|
Iwataki M, Kawami H, Mizushima K, et al. 2008. Phylogenetic relationships in the harmful dinoflagellate Cochlodinium polykrikoides (Gymnodiniales, Dinophyceae) inferred from LSU rDNA sequences. Harmful Algae, 7(3): 271–277
|
Iwataki M, Takayama H, Takahashi K, et al. 2015. Taxonomy and distribution of the unarmored dinoflagellates Cochlodinium polykrikoides and C. fulvescens. In: Ohtsuka S, Suzaki T, Horiguchi T, eds. Marine Protists. Tokyo, Japan: Springer, 551–565
|
Katoh K, Misawa K, Kuma K I, et al. 2002. MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Research, 30(14): 3059–3066
|
Kofoid C A, Swezy O. 1921. The Free-Living Unarmored Dinoflagellata. v 5. Berkeley, California: University of California Press, 1–564
|
Kudela R M, Gobler C J. 2012. Harmful dinoflagellate blooms caused by Cochlodinium sp.: global expansion and ecological strategies facilitating bloom formation. Harmful Algae, 14: 71–86
|
Law S P C, Lee F Y K. 2013. Harmful Marine Microalgae in Hong Kong. Hong Kong: Agriculture, Fisheries and Conservation Department, the Government of the Hong Kong Special Administrative Region, 47
|
Matsuoka K, Iwataki M, Kawami H. 2008. Morphology and taxonomy of chain-forming species of the genus Cochlodinium (Dinophyceae). Harmful Algae, 7(3): 261–270
|
Morquecho-Escamilla M L, Alonso-Rodríguez R. 2008. First record of Cochlodinium fulvescens in Mexican Pacific. Harmful Algae News, 37: 5–6
|
Munir S, Naz T, Burhan Z N, et al. 2012. First report of the athecate, chain forming dinoflagellate Cochlodinium fulvescens (Gymnodiniales) from Pakistan. Pakistan Journal of Botany, 44(6): 2129–2134
|
National Marine Environmental Monitoring Center, State Oceanic Administrate, People’s Republic of China. 2014. Bulletin of Aquaculture Environment Quality in Harmful Algal Bloom Monitoring Area (in Chinese). No. 8, 1-3
|
North China Sea Branch of State Oceanic Administration, People’s Republic of China. 2012. Bulletin of Marine Disasters in the North China Sea (in Chinese). http://123.234.129.76:8088/search1/WebSite/cms/SearchInfoList.aspx?searchContent=%E6%B5%B7%E6%B4%8B%E7%81%BE%E5%AE%B3%E5%85%AC%E6%8A%A5 [2013-06-18/2014-12-16]
|
North China Sea Branch of State Oceanic Administration, People’s Republic of China. 2014. Bulletin of Marine Disasters in the North China Sea (in Chinese). http://123.234.129.76:8088/search1/WebSite/cms/SearchInfoList.aspx?searchContent=%E6%B5%B7%E6%B4%8B%E7%81%BE%E5%AE%B3%E5%85%AC%E6%8A%A5 [2015-03-18/2015-07-06]
|
North China Sea Branch of State Oceanic Administration, People’s Republic of China. 2015. Bulletin of Marine Disasters in the North China Sea (in Chinese). http://123.234.129.76:8088/search1/WebSite/cms/SearchInfoList.aspx?searchContent=%E6%B5%B7%E6%B4%8B%E7%81%BE%E5%AE%B3%E5%85%AC%E6%8A%A5 [2016-04-11/2016-05-17]
|
North China Sea Branch of State Oceanic Administration, People’s Republic of China. 2016. Bulletin of Marine Disasters in the North China Sea (in Chinese). http://123.234.129.76:8088/search1/WebSite/cms/SearchInfoList.aspx?searchContent=%E6%B5%B7%E6%B4%8B%E7%81%BE%E5%AE%B3%E5%85%AC%E6%8A%A5 [2017-05-25/2017-06-04]
|
Pan Yulong, Li Ruixiang, Li Yan, et al. 2012. A contribution to the taxonomy of Gymnoids in coasts of China. Advances in Marine Science (in Chinese), 30(3): 390–401
|
Posada D. 2008. jModelTest: phylogenetic model averaging. Molecular Biology and Evolution, 25(7): 1253–1256
|
Reñé A, Camp J, Garcés E. 2015. Diversity and phylogeny of Gymnodiniales (Dinophyceae) from the NW Mediterranean Sea revealed by a morphological and molecular approach. Protist, 166(2): 234–263
|
Reñé A, de Salas M, Camp J, et al. 2013. A new clade, based on partial LSU rDNA sequences, of unarmoured dinoflagellates. Protist, 164(5): 673–685
|
Richlen M L, Morton S L, Jamali E A, et al. 2010. The catastrophic 2008–2009 red tide in the Arabian Gulf region, with observations on the identification and phylogeny of the fish-killing dinoflagellate Cochlodinium polykrikoides. Harmful Algae, 9(2): 163–172
|
Ronquist F, Huelsenbeck J P. 2003. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics, 19(12): 1572–1574
|
Scholin C A, Herzog M, Sogin M, et al. 1994. Identification of group- and strain-specific genetic markers for globally distributed Alexandrium (Dinophyceae): Ⅱ. Sequence analysis of a fragment of the LSU rRNA gene. Journal of Phycology, 30(6): 999–1011
|
Schütt F. 1896. Peridiniales. In: Engler A, Prantl K, eds. Die Natürlichen Pflanzenfamilien. Leipzig: Engelmann, 1–30
|
Tang Yingzhong, Gobler C J. 2012. The toxic dinoflagellate Cochlodinium polykrikoides (Dinophyceae) produces resting cysts. Harmful Algae, 20: 71–80
|
Thangaraj P, Park T G, Ki J S. 2017. Molecular cloning reveals co-occurring species behind red tide blooms of the harmful dinoflagellate Cochlodinium polykrikoides. Biochemical Systematics and Ecology, 70: 29–34
|
Tomas C R, Smayda T . 2008. Red tide blooms of Cochlodinium polykrikoides in a coastal cove. Harmful Algae, 7(3): 308–317
|
Wang Hongxia, Lu Douding, He Piaoxia, et al. 2014. Morphology and phylogeny of dinoflagellate Cochlodinium polykrikoides from the East China Sea. Oceanologia et Limnologia Sinica (in Chinese), 45(4): 757–763
|
Whyte J N C, Haigh N, Ginther N G, et al. 2001. First record of blooms of Cochlodinium sp. (Gymnodiniales, Dinophyceae) causing mortality to aquacultured salmon on the west coast of Canada. Phycologia, 40(3): 298–304
|
Yu Wenling, Long Hua, Wang Hongxia, et al. 2011. Analysis of Cochlodinium polykrikoides bloom event - a new record of harmful algal bloom-forming species in East China Sea. Ocean Development and Management (in Chinese), (11): 66–68, 123
|