Citation: | LI Yuan, ZHANG Liyan, SONG Puqing, ZHANG Ran, WANG Liangming, LIN Longshan. Fish diversity and molecular taxonomy in the Prydz Bay during the 29th CHINARE[J]. Acta Oceanologica Sinica, 2018, 37(8): 15-20. doi: 10.1007/s13131-018-1228-y |
Chen Weitao, Ma Xiuhui, Shen Yanjun, et al. 2015. The fish diversity in the upper reaches of the Salween River, Nujiang River, revealed by DNA barcoding. Scientific Reports, 5:17437, doi: 10.1038/srep17437
|
Dettai A, Adamowizc S J, Allcock L, et al. 2011a. DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey. Polar Science, 5(2):298-312
|
Dettai A, Berkani M, Lautredou A C, et al. 2012. Tracking the elusive monophyly of nototheniid fishes (Teleostei) with multiple mitochondrial and nuclear markers. Marine Genomics, 8:49-58
|
Dettai A, Lautredou A C, Bonillo C, et al. 2011b. The actinopterygian diversity of the CEAMARC cruises:barcoding and molecular taxonomy as a multi-level tool for new findings. Deep Sea Research Part Ⅱ:Topical Studies in Oceanography, 58(1-2):250-263
|
Eastman J T. 2005. The nature of the diversity of Antarctic fishes. Polar Biology, 28(2):93-107
|
Eastman J T, DeVries A L. 1982. Buoyancy studies of notothenioid fishes in McMurdo Sound, Antarctica. Copeia, 1982(2):385-393
|
Eastman J T, Eakin R R. 2014. Notothenioid classification and list of species. Ohio University. http://www.oucom.ohiou.edu/dbms-eastman/index.htm[2014-04-14/2016-10-29]
|
Eastman J T, Hubold G. 1999. The fish fauna of the Ross Sea, Antarctica. Antarctic Science, 11(3):293-304
|
Excoffier L, Laval G, Schneider S. 2005. Arlequin (version 3. 0):an integrated software package for population genetics data analysis. Evolutionary Bioinformatics, 1:47-50
|
Fallon N G, Collins M A, Marshall C T, et al. 2016. Assessing consistency of fish survey data:uncertainties in the estimation of mackerel icefish (Champsocephalus gunnari) abundance at South Georgia. Polar Biology, 39(4):593-603
|
Fischer W, Hureau J C. 1985. FAO species identification sheets for fishery purposes:Southern Ocean (Fishing areas 48, 58 and 88), vol. I and Ⅱ. Rome:FAO
|
Gao Guoping, Dong Zhaoqian, Shi Maochong, et al. 2013. Advances of physical oceanographic study on Prydz Bay and adjacent region, Antarctica. Journal of Shanghai Ocean University (in Chinese), 22(2):313-320
|
Gon O. 1990. Bathydraconidae. In:Gon O, Heemstra P C, eds. Fishes of the Southern Ocean. Grahamstown:J L B Smith Institute of Ichthyology, 364-380
|
Hebert P D N, Cywinska A, Ball S L, et al. 2003a. Biological identifications through DNA barcodes. Proceedings of the Royal Society B:Biological Sciences, 270(1512):313-321
|
Hebert P D N, Ratnasingham S, de Waard J R. 2003b. Barcoding animal life:cytochrome c oxidase subunit 1 divergences among closely related species. Proceedings of the Royal Society B:Biological Sciences, 270(Sup 1):S96-S99
|
Hebert P D N, Stoeckle M Y, Zemlak T S, et al. 2004. Identification of birds through DNA barcodes. PLoS Biology, 2(10):e312, doi: 10.1371/journal.pbio.0020312
|
Keskin E, Ağdamar S, Tarkan A S. 2013. DNA barcoding common non-native freshwater fish species in Turkey:Low genetic diversity but high population structuring. Mitochondrial DNA, 24(3):276-287
|
Krück N C, Tibbetts I R, Ward R D, et al. 2013. Multi-gene barcoding to discriminate sibling species within a morphologically difficult fish genus (Sillago). Fisheries Research, 143:39-46
|
Lecointre G, Améziane N, Boisselier M C, et al. 2013. Is the species flock concept operational? The Antarctic shelf case.. PLoS One, 8(8):e68787, doi: 10.1371/journal.pone.0068787
|
Loh W K W, Bond P, Ashton K J, et al. 2014. DNA barcoding of freshwater fishes and the development of a quantitative qPCR assay for the species-specific detection and quantification of fish larvae from plankton samples. Journal of Fish Biology, 85(2):307-328
|
Ma Chunyan, Ma Hongyu, Ni Yong, et al. 2015. Molecular identification of the genus Thryssa based on DNA barcoding. Genetics and Molecular Research, 14(4):18580-18586
|
Meier R, Zhang Guanyang, Ali F. 2008. The use of mean instead of smallest interspecific distances exaggerates the size of the "barcoding gap" and leads to misidentification. Systematic Biology, 57(5):809-813
|
Miyamoto Y, Tanimura A. 1999. Behavior of the Antarctic fish Trematomus bernacchii (Pisces, Nototheniidae) beneath the sea ice near the Antarctic station Syowa using acoustic biotelemetry. Fisheries Science, 65(2):315-316
|
Murphy K R, Kalmanek E A, Cheng C H C. 2017. Diversity and biogeography of larval and juvenile notothenioid fishes in McMurdo Sound, Antarctica. Polar Biology, 40(1):161-176
|
Sambrook J, Fritsch E F, Maniatis T. 1989. Molecular Cloning:A Laboratory Manual. New York:Cold Spring Harbor Laboratory Press
|
Shen Yanjun, Guan Lihong, Wang Dengqiang, et al. 2016. DNA barcoding and evaluation of genetic diversity in Cyprinidae fish in the midstream of the Yangtze River. Ecology and Evolution, 6(9):2702-2713
|
Srivathsan A, Meier R. 2012. On the inappropriate use of Kimura-2-parameter (K2P) divergences in the DNA-barcoding literature. Cladistics, 28(2):190-194
|
Tamura K, Peterson D, Peterson N, et al. 2011. MEGA5:molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Molecular Biology and Evolution, 28(10):2731-2739
|
Van de Putte A P, Jackson G D, Pakhomov E, et al. 2010. Distribution of squid and fish in the pelagic zone of the Cosmonaut Sea and Prydz Bay region during the BROKE-West campaign. Deep Sea Research Part Ⅱ:Topical Studies in Oceanography, 57(9-10):956-967
|
Ward R D, Zemlak T S, Innes B H, et al. 2005. DNA barcoding Australia's fish species. Philosophical Transactions of the Royal Society B:Biological Sciences, 360(1462):1847-1857
|
Wong E H K, Hanner R H. 2008. DNA barcoding detects market substitution in North American seafood. Food Research International, 41(8):828-837
|
Yin Xijie, Li Yunhai, Qiao Lei, et al. 2014. Source and spatial distributions of particulate organic carbon and its isotope in surface waters of Prydz Bay, Antarctica, during summer. Advances in Polar Science, 25(3):175-182
|